Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015914951.1_cds_XP_016464884.1_57885
CDS Infomation

[gene=LOC107787793] [db_xref=GeneID:107787793] [protein=uncharacterized protein LOC107787793] [protein_id=XP_016464884.1] [location=join(18388..18826,18911..18972,26166..27179,27273..27339,27436..27498,28028..28091,28216..28309,28400..28483,28563..28652,28747..28774,29073..29594,29693..29754,29991..30100,30188..30275,30362..30667)] [gbkey=CDS]
Sequence

ATGGAATTTCAACTAACCTCATTCTCCGCCACCACCACTACTGATATTTCCGACCTACAA
AAAGCATGGCATATTTTCGCTCTTCTATTATCAACAGGACGACCAGCTCGGCCGTCGGAG
CTTTCATCCAAATGCACCTTATTTTCTACTTCCCCGGAATTCATCGAATTTCTCTGTTTC
ATTCCTAATTCTCCTCTCCATTTGACGAGCAATTACTTCGTCACTTTTTCTCAATTAGGA
TTTGTATCAACCGTGAAATTCTTCGCTAATGCGAATGTGTCTCCGGCTTACGTACCTCAG
CTGGAGTTTCGAGGTTTCCAGATGAGACGAGAGAGTGAGTGTGTATTTAGGACTTACTAT
AGGAAAAGGAAGAGAGCTAGATCGGAGGTTGAGTATTCATACGTGGTTACTAAAAGAGGA
TGCTTCAACAATTTTGACGTTGAGCAAGGAAGCCAAGTGATGGTGAATTTGCCTTCAATG
ACTCGGAGGATTTGTGGACAGGCATATCTCCCCAATGGCAGTTTGAGTTGTGGCATGAAT
CAGTTGACAAGAATACCAGTGTCATTGGCTTGCGACTTCAATAGAGTTTATGAGATGTTC
AGAACTTCTTCGATAATTGAAGGTAGTGCCAGACCATCAAGTTCTAGACTTAAATGTGTT
GAATATGAATGTGAAGAGGAGATAGACAAAGGAAAGAACAACAACAACAAAAGAGAGAAC
AGTTGTAAAACAAATTTTGTACATAAACCTATCTGTAAATCTAAAATTCTTAGTCACAGC
GTGTTCAACGCCCCTAAATCAACCGCAGTTGAAAGTATCACAGATCCCGTACTTCAGCTA
AAGCCACTTCACATTAGTTCATTGGAAACCACATGTACCAGTATAACTGCTGAGACGGTT
GATACAAAAGAAAGCAAAATAAACTCTGACATAAATTCCTGTACAAAAGTGGACAAAGAA
ATGGAAATTCTGCTATCTGCAGCTGATACTTCAGTCCAAGGTTTTGAAAAGATGACTCAA
ATGGAAAATTTTGTGGAAGGCAACGAAGAAGAACCCGCTTCTTATCCTGTTAATAATAGA
AACATTAACTGCACTGAGATTCATCCAGCAAAGGCGGACAAATCCCCTCAAGATACTCCT
TTAGAGAATGCTACCATGGGATGCACGACAGCATTTCTCCACATGGAAACAGCAAAAACA
GATATGCCTCCACAGAATCATGCCATCTTAGTGCACACACAATCTGCGGGTCAGAAGCAG
CTCGGAAAATCATCCCCTAATTCTAAACCCTTTCAACGGGATGTACTAGATCACAGGGAG
CAAAGGTCTTCCAAGGCACTGAAGATTCACAATGCTGCCAGTCTGCTTCTCGACAAAGCG
CAACTCAGAAGAGATGCAAAGTCAATCCCCATGAAACTGAAGCACACACAGAACTATGAC
TTGGGTGTGAGTATTATAGAGAGGAATGGAAATCCAAATGAAAATGGGGAAAATTTCGTA
TGTAACTCCACAAAAAATCAATCAGAGCAAAAACAATTGCCTAACCTTGAGTTCTATACT
GTGGAGGACGAAGAGGGTTCAGGTGGTTATGGGACAGTGTACAGGGCAAGGAGAAAGAGT
GATGGAGTGAAGTTTGCAATTAAATGTCCTCACCCAAATGCTAACAAACAACATGTCCTT
AATGAGTTGAAGATGCTGGAGCGCTTTGGGGGAAAGAACTTTGTAATTAAGTATGAAGGA
TCATTCAAGAATGGAAATTCTGATTGCCTTGTTCTAGAGCATGTCGAGCATGATAGACCA
GAGGTCTTGAAAAGAGATATAGATGTTTCCCAGCTCCGGTGGTATGGCTATTGCATGTTC
AGGGCACTTGCTGGTTTACACAAACAGGGTATTGTTCATAGAGATGTTAAACCTGGAAAC
TTTCTTTTTTCTACCAAGGCTAATAAAGGTTACCTCATTGACTTTAACCTTGCCCTGGAT
CTGCACCAGAAATATGGAACATCAGACAAGACAAAGTTGAGCCACGCCACAAGCTCTAAT
AATGGTCCTATACCCGTTGCCAAGTCTCTTCCTCCAATTAAACAAAGAAAATACATTGCA
AAACCTGAGGAAGGCATCAAACAGGAAGCAGGAAAAGGCATTAAGTCTCTAATACGACCC
AAAAACCTGAAAAGGAAGGCTGACCAAGAAAAGATCAGCGCAGATATTGCATATAGGAGT
ATTAAAAAAAGTCAAGGTGCTGATGGTTCGGGGATAACCTCAGCAAAGGATGCAACAAGC
AATAGGACACCATCAGCTGAAAGGTTGAGAGAACCCCTTCCATCTCAAGGTAGGAAGGAG
CTGATTAACCTGGTGCAAGAAGCACTTCAAGGTTCAAATCATGGAGAAACGAATGGTCCA
ACTTCCAAGAGAAAAAGGGTTGCTGCAACTCCTGGAAAAGCAGAAAGGAAGTATGTTTAC
CCAACTCCAATGCCATTGCATTCATCTGGAATTGCCATTGGTGGTGCTGGTTTGCTGAAA
AGCAAAGGGGACGGGAAACACAAGCGAGAAGGACCATGTGTTGGAACTAAGGGTTTCAGA
GCTCCAGAGGTGCTATTCCGATCTGTACATCAAGGTACAAAACTTGATATTTGGTCAGCT
GGTGTCACCTTACTCTATTTCATTATTGGCCGAACACCATTTGCAGGAGATCCTGACCAG
AACATAAAGGAAATCGTCAAATTGAAAGGAAGTGAAGATTTGTGGGAAGTGGCCAAACTA
CACAACCGAGAATCTTCATTTCCAGCGGATTTATTTGACCTAAAATCTCTGTCGCCTGTA
AGATTACGAGATTGGTGTTTAAGAAACACCCGAAAACAAGGTTTTCTAGAGATCATTCCA
CACTCACTTATCGATCTTGTGGACAAGTGTTTAACTGCGAATCCAAGATTGAGGATTAGT
GCAGAGGAAGCCCTCCGGCATGAGTACTTCTCTCCATGCCATGAAGCTTTGAGAAAGCAT
AGGCTTTATCGTCAAGGGCTCAGCCAAGAGATCCAAGACCCAGTGTCTACACTTCCCTTA
CCAGAAAATTCTGAAACATGTGGAGTATTGTAA

Peptide Sequence

PEP ID

XP_016464884.1
PEP Infomation

PREDICTED: uncharacterized protein LOC107787793 [Nicotiana tabacum]
Sequence

MEFQLTSFSATTTTDISDLQKAWHIFALLLSTGRPARPSELSSKCTLFSTSPEFIEFLCF
IPNSPLHLTSNYFVTFSQLGFVSTVKFFANANVSPAYVPQLEFRGFQMRRESECVFRTYY
RKRKRARSEVEYSYVVTKRGCFNNFDVEQGSQVMVNLPSMTRRICGQAYLPNGSLSCGMN
QLTRIPVSLACDFNRVYEMFRTSSIIEGSARPSSSRLKCVEYECEEEIDKGKNNNNKREN
SCKTNFVHKPICKSKILSHSVFNAPKSTAVESITDPVLQLKPLHISSLETTCTSITAETV
DTKESKINSDINSCTKVDKEMEILLSAADTSVQGFEKMTQMENFVEGNEEEPASYPVNNR
NINCTEIHPAKADKSPQDTPLENATMGCTTAFLHMETAKTDMPPQNHAILVHTQSAGQKQ
LGKSSPNSKPFQRDVLDHREQRSSKALKIHNAASLLLDKAQLRRDAKSIPMKLKHTQNYD
LGVSIIERNGNPNENGENFVCNSTKNQSEQKQLPNLEFYTVEDEEGSGGYGTVYRARRKS
DGVKFAIKCPHPNANKQHVLNELKMLERFGGKNFVIKYEGSFKNGNSDCLVLEHVEHDRP
EVLKRDIDVSQLRWYGYCMFRALAGLHKQGIVHRDVKPGNFLFSTKANKGYLIDFNLALD
LHQKYGTSDKTKLSHATSSNNGPIPVAKSLPPIKQRKYIAKPEEGIKQEAGKGIKSLIRP
KNLKRKADQEKISADIAYRSIKKSQGADGSGITSAKDATSNRTPSAERLREPLPSQGRKE
LINLVQEALQGSNHGETNGPTSKRKRVAATPGKAERKYVYPTPMPLHSSGIAIGGAGLLK
SKGDGKHKREGPCVGTKGFRAPEVLFRSVHQGTKLDIWSAGVTLLYFIIGRTPFAGDPDQ
NIKEIVKLKGSEDLWEVAKLHNRESSFPADLFDLKSLSPVRLRDWCLRNTRKQGFLEIIP
HSLIDLVDKCLTANPRLRISAEEALRHEYFSPCHEALRKHRLYRQGLSQEIQDPVSTLPL
PENSETCGVL

Transcript Sequence

Gene sequence data has not been registered.